Build bioinformatics workflows with every step visible.
A visual canvas for building and running bioinformatics workflows.
1370 nodes · 61 categories · local execution · cloud beta
Explore the 22-node RNA-Seq template.
This interactive preview shows the bundled template’s nodes, parameters, and ports. The run animation and inline output previews are illustrative; no analysis is executing here. Zoom in to inspect any step.
Straight from the app.
The same screenshots as our README, one per screen. The node editor, the parameter panels, the run console, and the execution backends, exactly as they ship.
Turn a paper into a starting workflow.
Enter a DOI to explore a suggested workflow based on the paper’s available information. Open it in the editor as a starting point and shape it into your own analysis.
Illustrative workflow preview
Example single-cell RNA-seq workflow
Fixed example steps; no paper is retrieved for this preview.
Built-in tools with visible environments.
1370 built-in nodes cover the stack, and each one is inspectable on the canvas before you run anything. BioNodulo provisions supported environments from the tools’ own package metadata, with the requirements in plain sight before the run starts.
- nodes
- 1370
- categories
- 61
- bundled templates
- 23
nodes
categories
templates
Describe it, and watch it build.
An agent inside the editor. It reads your graph, adds and validates nodes against the real registry, runs the workflow, then reads the logs and fixes what broke. You review the plan instead of wiring every step by hand.
nodes validated against the registry before they land
Edit together, in real time.
Two people, one canvas. Presence cursors show who’s where, you can follow a teammate around the graph, and comment pins keep the discussion on the node it’s about — a CRDT keeps every edit in sync with no merge conflicts.
- Presence cursors & follow-user
- Comment pins anchored to nodes
- Conflict-free multiplayer editing
The same canvas, with cloud compute behind it.
The cloud path, built on SkyPilot, is in beta. Submit the same workflow representation from the canvas, choose a resource profile, and follow its status while launch canaries and production operations are finalized.
Start faster
23 bundled workflow starting points.
RNA-Seq, variant calling, single-cell, metagenomics, proteomics, and more. Open one on the canvas, inspect every step, and adapt it to your data.
Build your first pipeline in minutes.
Download the open-source desktop app and open one of 23 templates, or launch the cloud platform for RAM-heavy analyses.